M8MatchChain Member List

This is the complete list of members for M8MatchChain, including all inherited members.

_first	M8MatchChain	[private]
_last	M8MatchChain	[private]
add(M8Match *m)	M8MatchChain
avgIdentity() const	M8MatchChain	[inline]
chain	M8MatchChain	[private]
direction() const	M8MatchChain
getQueryBegin() const	M8MatchChain
getQueryEnd() const	M8MatchChain
getTargetBegin() const	M8MatchChain
getTargetEnd() const	M8MatchChain
hasFirst() const	M8MatchChain	[inline]
hasLast() const	M8MatchChain	[inline]
M8MatchChain()	M8MatchChain	[inline]
M8MatchChain(M8Match *m)	M8MatchChain	[inline]
nofirst()	M8MatchChain	[inline]
nolast()	M8MatchChain	[inline]
operator<<(ostream &ous, const M8MatchChain &c)	M8MatchChain	[friend]
output(ostream &ous, char delimiter[]="\t") const	M8MatchChain
qchain	M8MatchChain	[private]
queryLength() const	M8MatchChain	[inline]
queryOverlap() const	M8MatchChain	[inline]
size() const	M8MatchChain	[inline]
sumaln	M8MatchChain	[private]
sumiden	M8MatchChain	[private]
sumscore	M8MatchChain	[private]
sumScore() const	M8MatchChain	[inline]
Tblastn class	M8MatchChain	[friend]