avgrange Member List

This is the complete list of members for avgrange, including all inherited members.

asDelimitedString(const char sep[]=",") const avgrange
avgrange()avgrange [inline]
avgrange(const alnrange &r)avgrange
avgrange(const alnrange *rp)avgrange
beginavgrange [private]
checkSplit(const avgrange &r, char sep[]=",") const avgrange
checkSplit_debug(const avgrange &r) const avgrange
colheaders()avgrange [inline, static]
covsavgrange [mutable, private]
endavgrange [private]
getBegin() const avgrange [inline]
getCount() const avgrange [inline]
getCov() const avgrange [inline]
getEnd() const avgrange [inline]
getMedianCov() const avgrange
getMembers() const avgrange [inline]
getNg() const avgrange [inline]
getScore() const avgrange [inline]
length() const avgrange [inline]
maxend() const avgrange [inline]
maxlength() const avgrange [inline]
membersavgrange [private]
merge(const alnrange *r)avgrange
merge(const avgrange *ar)avgrange
minbegin() const avgrange [inline]
navgrange [private]
operator<<(ostream &ous, const avgrange &ar)avgrange [friend]
overlap(const alnrange &r, const int margin=10)avgrange
sortedavgrange [mutable, private]
sqlinfo(ostream &ous)avgrange
sumbeginavgrange [private]
sumcovavgrange [private]
sumendavgrange [private]
sumngavgrange [private]
sumscoreavgrange [private]
testSplit(const avgrange &r, char sep[]=",") const avgrange
writeTable(ostream &ous) const avgrange
~avgrange()avgrange


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