avgrange Member List
This is the complete list of members for
avgrange, including all inherited members.
| asDelimitedString(const char sep[]=",") const | avgrange | |
| avgrange() | avgrange | [inline] |
| avgrange(const alnrange &r) | avgrange | |
| avgrange(const alnrange *rp) | avgrange | |
| begin | avgrange | [private] |
| checkSplit(const avgrange &r, char sep[]=",") const | avgrange | |
| checkSplit_debug(const avgrange &r) const | avgrange | |
| colheaders() | avgrange | [inline, static] |
| covs | avgrange | [mutable, private] |
| end | avgrange | [private] |
| getBegin() const | avgrange | [inline] |
| getCount() const | avgrange | [inline] |
| getCov() const | avgrange | [inline] |
| getEnd() const | avgrange | [inline] |
| getMedianCov() const | avgrange | |
| getMembers() const | avgrange | [inline] |
| getNg() const | avgrange | [inline] |
| getScore() const | avgrange | [inline] |
| length() const | avgrange | [inline] |
| maxend() const | avgrange | [inline] |
| maxlength() const | avgrange | [inline] |
| members | avgrange | [private] |
| merge(const alnrange *r) | avgrange | |
| merge(const avgrange *ar) | avgrange | |
| minbegin() const | avgrange | [inline] |
| n | avgrange | [private] |
| operator<<(ostream &ous, const avgrange &ar) | avgrange | [friend] |
| overlap(const alnrange &r, const int margin=10) | avgrange | |
| sorted | avgrange | [mutable, private] |
| sqlinfo(ostream &ous) | avgrange | |
| sumbegin | avgrange | [private] |
| sumcov | avgrange | [private] |
| sumend | avgrange | [private] |
| sumng | avgrange | [private] |
| sumscore | avgrange | [private] |
| testSplit(const avgrange &r, char sep[]=",") const | avgrange | |
| writeTable(ostream &ous) const | avgrange | |
| ~avgrange() | avgrange | |