kzseq Member List

This is the complete list of members for kzseq, including all inherited members.

copyRevcomp(const kzseq &ks)	kzseq
fastRead(caddr_t hstart, caddr_t sstart, size_t seqLen)	kzseq
getHeader() const	kzseq	[inline]
getName(char name[]) const	kzseq
header	kzseq	[private]
headlen() const	kzseq	[inline]
isDNA() const	kzseq
kzseq()	kzseq
kzseq(int alloc)	kzseq
maxlen	kzseq	[private]
operator=(const kzseq &ks)	kzseq
polyATsize(int &pA, int &pT) const	kzseq
rc	kzseq	[private]
readSeq(ifstream &infs, char ln[])	kzseq
revcomp(char rc[]) const	kzseq
revcomp()	kzseq
seq	kzseq	[private]
seq2upper()	kzseq
seqchar() const	kzseq	[inline]
seqhead() const	kzseq	[inline]
seqlen() const	kzseq	[inline]
slen	kzseq	[private]
~kzseq()	kzseq