rangePair Member List

This is the complete list of members for rangePair, including all inherited members.

alnrange()	alnrange	[inline]
alnrange(const alnrange &r)	alnrange
alnrange(int b, int e, double s, double ng, double c)	alnrange	[inline]
asDelimitedString(char sep[]=",") const	rangePair	[virtual]
asTabedString() const	rangePair	[virtual]
begin	alnrange	[protected]
cov	alnrange	[protected]
distance_cut	rangePair	[private, static]
end	alnrange	[protected]
essentialInfo() const	rangePair	[virtual]
fields()	rangePair	[static]
genomicInfo(char sep[]="\t") const	rangePair	[inline]
getBegin() const	alnrange	[inline]
getCov() const	alnrange	[inline]
getEnd() const	alnrange	[inline]
getGenomic() const	rangePair	[inline]
getNg() const	alnrange	[inline]
getScore() const	alnrange	[inline]
getStrand() const	rangePair	[inline]
getTcov() const	rangePair	[inline]
getTprtid() const	rangePair	[inline]
length() const	alnrange	[inline]
ngdiff_cut	rangePair	[private, static]
ngidentity	alnrange	[protected]
operator<<(ostream &ous, const alnrange &r)	alnrange	[friend]
operator=(const alnrange &r)	alnrange
overlap(const alnrange &r, const int margin)	alnrange
overlap(const alnrange &r)	alnrange
ovlpcut	alnrange	[protected, static]
ovlpfraction	alnrange	[protected, static]
rangePair()	rangePair	[inline]
rangePair(const rangePair &r)	rangePair
rangePair(int b, int e, double s, double ng, double c, const string &tpi, double tc, int tmi, const string &tgi, char tst, int ts, int te)	rangePair	[inline]
sameGene(const rangePair &r) const	rangePair
score	alnrange	[protected]
setIntronLimit(int length)	rangePair	[inline, static]
setmargin(int olpcut, float olpfrac)	alnrange	[inline, static]
tcov	rangePair	[private]
tend	rangePair	[private]
tgenomicid	rangePair	[private]
tmodelid	rangePair	[private]
tprtid	rangePair	[private]
tstart	rangePair	[private]
tstrand	rangePair	[private]
~alnrange()	alnrange	[inline, virtual]
~rangePair()	rangePair	[inline]