seqelem Class Reference

List of all members.

Public Member Functions
	seqelem ()
	seqelem (const seqelem &s)
	seqelem (const seqelem &s, int rc)
	seqelem (const string &str)
string &	getseq ()
void	lowerCount ()
void	addCount ()
int	count () const
Private Attributes
int	refcnt
string	seq

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Detailed Description

reference counted sequence element for map data sturcture

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Constructor & Destructor Documentation

seqelem::seqelem

(

)

[inline]

seqelem::seqelem

(

const seqelem &

s

)

[inline]

seqelem::seqelem	(	const seqelem &	s,
		int	rc
	)			[inline]

seqelem::seqelem

(

const string &

str

)

[inline]

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Member Function Documentation

string& seqelem::getseq

(

)

[inline]

References refcnt, and seq.

void seqelem::lowerCount

(

)

[inline]

References refcnt.

void seqelem::addCount

(

)

[inline]

References refcnt.

int seqelem::count

(

)

const [inline]

References refcnt.

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Member Data Documentation

int seqelem::refcnt [private]

Referenced by addCount(), count(), getseq(), and lowerCount().

string seqelem::seq [private]

Referenced by getseq().

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The documentation for this class was generated from the following file:

• cluster/chimeradetect_mysql.cpp