cleanshort.cpp File Reference

#include <iostream>
#include <fstream>
#include <string>
#include <cstring>
#include <cstdlib>

Functions
void	cleanfasta (const string &file, const string &ofile, const string &prefix)
void	trimN (string &seq)
bool	isSimple (const string &seq)
int	main (int argc, char *argv[])

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Function Documentation

void cleanfasta	(	const string &	file,
		const string &	ofile,
		const string &	prefix
	)

References ifstream(), isSimple(), and trimN().

Referenced by main().

bool isSimple

(

const string &

seq

)

Referenced by cleanfasta().

int main	(	int	argc,
		char *	argv[]
	)

References cleanfasta().

void trimN

(

string &

seq

)

Referenced by cleanfasta().