g2a.cpp File Reference

#include <iostream>
#include <fstream>
#include <cstring>
#include <set>
#include "strformat.h"
#include "date.h"
#include "feature.h"
#include "dseq.h"
#include "ref.h"
#include "head.h"

Functions
void	rwComment (istream &ins, char ln[], ostream &sout, ostream &pout, const seqinfo &sinf)
void	getInput (char inf[])
void	nameOutfile (const char ipf[], char po[], char ao[], char sf[], char subo[], char bado[])
int	main (int argc, char *argv[])

---

Function Documentation

void getInput

(

char

inf[]

)

int main	(	int	argc,
		char *	argv[]
	)

References seqinfo::acc, gberr::context(), ref::dump(), head::dump(), feature::dumpFeat(), head::getHead(), head::getOrganism(), ifstream(), dseq::input(), feature::is(), feature::isjoinseg(), LINE, head::loadSeqInfo(), seqinfo::name(), nameOutfile(), feature::newfeat(), seqinfo::org, feature::output(), head::phylogeny(), featerr::print(), gberr::print(), gberr::prtContext(), feature::read(), ref::read(), rwComment(), ref::title(), feature::wjoinseg(), and dseq::write().

void nameOutfile	(	const char	ipf[],
		char	po[],
		char	ao[],
		char	sf[],
		char	subo[],
		char	bado[]
	)

void rwComment	(	istream &	ins,
		char	ln[],
		ostream &	sout,
		ostream &	pout,
		const seqinfo &	sinf
	)

References seqinfo::acc, and LINE.

Referenced by main().