Here is a list of all file members with links to the files they belong to:

- l -

• L : sim4.h , codon.h
• Lamda() : oldbionj.c
• last_AC : sim4b1.cpp , sim4b1.h
• last_AG : sim4b1.cpp , sim4b1.h
• last_CT : sim4b1.cpp , sim4b1.h
• last_GT : sim4b1.cpp , sim4b1.h
• lastwd() : strformat.cpp , strformat.h
• lastword() : strformat.cpp , strformat.h
• lc() : strformat.cpp , strformat.h
• leadingspace() : gentree.cpp , gentree.h
• leak : README
• LEN : initialize.h , njtree.h , oldbionj.c
• length : TestAcedb.java
• lessRangeByDirectional() : Range.cpp , Range.h
• levelorder() : gentree.h , gentree.cpp , gentree.h
• LINE : blast.h , blpurify.cpp , feature.cpp , gbfn.h , head.h , ref.h , head.h , blast.h
• LINEAR : seqaln.h
• link_msps() : sim4b1.cpp
• link_to_data_list() : sim4b1.cpp , sim4b1.h
• linreg() : linreg.c
• list2map() : breakcl.cpp
• listgap() : alignment.cc , alignment.h , alnmodel.cc , seqaln2gapos.cpp
• LL : sim4.h
• LLEN : picknewseq.cpp
• load_distrib() : aln_input.h , aln_input.c , aln_input.h
• load_mat() : aln_input.h , aln_input.c , aln_input.h
• load_pro() : aln_input.h , aln_input.c , aln_input.h
• load_seq() : ls20.c , aln_input.h , aln_input.c , aln_input.h
• load_seq_fromstr() : aln_input.h , aln_input.c , aln_input.h
• load_seq_lite() : aln_input.h , aln_input.c , aln_input.h
• LoadCDSFromAce() : LoadCDSFromAce.java , README
• loadClusterIntoDB() : loadpgdb.cpp , loadpgdb.h
• loadDeltaFunction() : aln_input.c , aln_input.h
• loadFastaIntoMap() : bioseq.h , bioseq.cpp
• loadFrom() : LoadCDSFromAce.java
• loadGenomic() : doublestop.cpp
• loadGenomicFromScaffoldSeq() : doublestop.cpp
• loadGenomicInfo() : testrange.cpp , pfog.cpp
• loadIntoTable() : gecods_mysql.cpp
• loadModelGeneTable() : gathergene.cpp
• loadOrganism() : LoadCDSFromAce.java
• loadPrimaryTables() : nrep.cpp
• loadProtein() : preparegw.cpp , dbaln.cpp
• loadProteinInfo() : pfog.cpp , pfogmultipledb.cpp , testrange.cpp
• LOCAL : seqaln.h , dynaln.h
• localS() : alnfn.h , localS.c , alnfn.h
• longestNoStartORFPlus() : bioseq.cpp , bioseq.h
• longestNoStopORFPlus() : bioseq.cpp , bioseq.h
• longestORFIndex() : bioseq.cpp
• longestORFPlus() : bioseq.cpp , bioseq.h , bioseq.cpp
• longestORFPlusPrefix() : bioseq.cpp , bioseq.h
• longestORFPlusSuffix() : bioseq.h , bioseq.cpp
• longModelCutoff : pickrepmodel.cpp
• longPregnant() : preparegw.cpp
• longrep() : picklongrep.cpp
• loss1Intron() : alnexon.cpp
• loss1IntronFront() : alnexon.cpp
• loss2Intron() : alnexon.cpp
• loss2IntronFront() : alnexon.cpp
• lsdeclump() : alnfn.h , lsdeclump.c