#include <stdio.h>#include "seqaln.h"Functions | |
| pfitS (struct SEQALN_PROFILE *pro, struct SEQALN_SEQUENCE *seq, struct SEQALN_CONSTANTS *scoring, struct SEQALN_RESULTS *results, struct SEQALN_IO *io) | |
| pfitS | ( | struct SEQALN_PROFILE * | pro, | |
| struct SEQALN_SEQUENCE * | seq, | |||
| struct SEQALN_CONSTANTS * | scoring, | |||
| struct SEQALN_RESULTS * | results, | |||
| struct SEQALN_IO * | io | |||
| ) |
References SEQALN_CONSTANTS::alpha, SEQALN_RESULTS::bestS, SEQALN_RESULTS::bestSi, SEQALN_RESULTS::bestSj, SEQALN_CONSTANTS::beta, SEQALN_SEQUENCE::code, SEQALN_CONSTANTS::deltafn, E, SEQALN_RESULTS::F, gap(), SEQALN_SEQUENCE::len, LINEAR, max, max3(), SEQALN_CONSTANTS::memuse, SEQALN_CONSTANTS::palpha, SEQALN_CONSTANTS::pbeta, pgap(), prpt_row(), SEQALN_CONSTANTS::rptmat, and SEQALN_RESULTS::S.
Referenced by main().
1.5.6