picknewseq.cpp File Reference

#include <iostream>
#include <fstream>
#include <sstream>
#include "version.h"
#include <set>
#include <cstring>

Functions
void	chopEnds (char *&w)
void	readAcc (ifstream &ins, set< version > &vset)
void	save (ostringstream &bf, ifstream &ins, ofstream &ous)
int	main (int argc, char *argv[])
Variables
const int	LLEN = 83

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Function Documentation

void chopEnds

(

char *&

w

)

removes double quotes from beginning and ends

Referenced by readAcc().

int main	(	int	argc,
		char *	argv[]
	)

Compares the ACC.version file from one file with the GenBank flat file. Picks new entries from the GenBank flat file First go to ace and run the aql select s->version from s in class sequence and dump the result as text

References version::get(), ifstream(), LLEN, version::newer(), readAcc(), and save().

void readAcc	(	ifstream &	ins,
		set< version > &	vset
	)

References chopEnds(), LLEN, and version::quickGet().

Referenced by main().

void save	(	ostringstream &	bf,
		ifstream &	ins,
		ofstream &	ous
	)

References LLEN.

Referenced by main().

---

Variable Documentation

const int LLEN = 83

Referenced by main(), readAcc(), and save().