picktopcds.cpp File Reference

#include <mysql++.h>
#include <iostream>
#include <fstream>
#include "Range.h"
#include "Model.h"

Functions
void	createCDSTable (Connection &dbh, const string &cdstab, const string &rmtab, const string &cdstoptab)
void	filterCDS (Connection &conn, const string &exabstab, const string &cdsabstab, const string &removetab, const string &cdstoptab)
void	checkcontain (vector< Model * > &mdls, vector< string > &removed)
void	clearMemory (vector< Model * > &mdls)
void	storeInDelTable (Connection &conn, const vector< string > &rm, const string tabname)
void	createRemovedTable (Connection &dbh, const string &tab)
int	main (int argc, char *argv[])

---

Function Documentation

void checkcontain	(	vector< Model * > &	mdls,
		vector< string > &	removed
	)

References Range::merge().

Referenced by filterCDS().

void clearMemory

(

vector< Model * > &

mdls

)

Referenced by filterCDS().

void createCDSTable	(	Connection &	dbh,
		const string &	cdstab,
		const string &	rmtab,
		const string &	cdstoptab
	)

Referenced by filterCDS().

void createRemovedTable	(	Connection &	dbh,
		const string &	tab
	)

Referenced by storeInDelTable().

void filterCDS	(	Connection &	conn,
		const string &	exabstab,
		const string &	cdsabstab,
		const string &	removetab,
		const string &	cdstoptab
	)

References Model::addExon(), checkcontain(), clearMemory(), createCDSTable(), storeInDelTable(), and string().

Referenced by main().

int main	(	int	argc,
		char *	argv[]
	)

References filterCDS(), and user.

void storeInDelTable	(	Connection &	conn,
		const vector< string > &	rm,
		const string	tabname
	)

References createRemovedTable().