prnt.h

Go to the documentation of this file.
00001 #ifndef SIM_PRNT_H
00002 #define SIM_PRNT_H
00003 #include "kzseq.h"
00004 /* $Id: prnt.h,v 1.1.1.1 2007-07-13 03:44:06 kzhou Exp $ */
00005 
00006 typedef unsigned int edit_op_t; /* 32 bits */
00007 
00008 //void print_align_header(SEQ *seq1, SEQ *seq2, argv_scores_t *ds);
00009 void print_align_header(kzseq &seq1, kzseq& seq2, argv_scores_t *ds);
00010 void print_align(int score, const char *seq1, const char *seq2, int beg1, int end1, int beg2, int end2, int *S);
00011 
00012 
00013 #endif