Cutoff Struct Reference

List of all members.

Public Member Functions
	Cutoff ()
string	ngString () const
string	idenString () const
string	chimera_covString () const
string	split_covString () const
Public Attributes
float	ng
float	iden
float	e
int	alnlen
int	modellen
int	hitlen
float	chimera_cov
float	split_cov

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Detailed Description

some cutoff values

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Constructor & Destructor Documentation

Cutoff::Cutoff

(

)

[inline]

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Member Function Documentation

string Cutoff::ngString

(

)

const [inline]

References ng, and string().

Referenced by create_alnsplit().

string Cutoff::idenString

(

)

const [inline]

References iden, and string().

Referenced by create_alnsplit().

string Cutoff::chimera_covString

(

)

const [inline]

References chimera_cov, and string().

string Cutoff::split_covString

(

)

const [inline]

References split_cov, and string().

Referenced by create_alnsplit().

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Member Data Documentation

float Cutoff::ng

Referenced by create_alnchimera(), create_modelaln(), main(), and ngString().

float Cutoff::iden

Referenced by create_alnchimera(), create_modelaln(), idenString(), and main().

float Cutoff::e

Referenced by create_modelaln(), and main().

int Cutoff::alnlen

Referenced by create_modelaln(), and main().

int Cutoff::modellen

Referenced by create_modelaln(), and main().

int Cutoff::hitlen

Referenced by create_modelaln(), and main().

float Cutoff::chimera_cov

Referenced by chimera_covString(), create_alnchimera(), and main().

float Cutoff::split_cov

Referenced by create_alnsplit(), main(), and split_covString().

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The documentation for this struct was generated from the following file:

• cluster/chimeradetect_mysql.cpp