topscore.c File Reference

#include <stdio.h>
#include <malloc.h>
#include "seqaln.h"

Functions
	topscore (struct SEQALN_SEQUENCE *seq1, struct SEQALN_SEQUENCE *seq2, struct SEQALN_CONSTANTS *scoring, struct SEQALN_RESULTS *results, struct SEQALN_IO *io)

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Function Documentation

topscore	(	struct SEQALN_SEQUENCE *	seq1,
		struct SEQALN_SEQUENCE*	seq2,
		struct SEQALN_CONSTANTS *	scoring,
		struct SEQALN_RESULTS *	results,
		struct SEQALN_IO *	io
	)

References SEQALN_CONSTANTS::Debug, SEQALN_CONSTANTS::deltafn, gap(), MATRIX, max, SEQALN_RESULTS::maxentry, SEQALN_CONSTANTS::mtype, NONMATRIX, PROFILE, SIMILARITY, SEQALN_IO::STDOUT, and SEQALN_CONSTANTS::stype.

Referenced by initmaxS(), and results_init().